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Samuel Barnett
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Soil characteristics and land-use drive bacterial community assembly patterns
SE Barnett, ND Youngblut, DH Buckley
FEMS Microbiology Ecology 96 (1), fiz194, 2020
872020
Inhibition of fungal pathogens across genotypes and temperatures by amphibian skin bacteria
CR Muletz-Wolz, JG Almario, SE Barnett, A Martel, F Pasmans
Frontiers in microbiology 8, 291948, 2017
722017
Evidence for phylogenetically and catabolically diverse active diazotrophs in deep-sea sediment
BJ Kapili, SE Barnett, DH Buckley, AE Dekas
The ISME journal 14 (4), 971-983, 2020
542020
Multisubstrate DNA stable isotope probing reveals guild structure of bacteria that mediate soil carbon cycling
SE Barnett, ND Youngblut, CN Koechli, DH Buckley
Proceedings of the National Academy of Sciences 118 (47), e2115292118, 2021
532021
HTSSIP: an R package for analysis of high throughput sequencing data from nucleic acid stable isotope probing (SIP) experiments
ND Youngblut, SE Barnett, DH Buckley
PLoS One 13 (1), e0189616, 2018
482018
SIPSim: a modeling toolkit to predict accuracy and aid design of DNA-SIP experiments
ND Youngblut, SE Barnett, DH Buckley
Frontiers in microbiology 9, 570, 2018
452018
Diverse genotypes of the amphibian‐killing fungus produce distinct phenotypes through plastic responses to temperature
CR Muletz‐Wolz, SE Barnett, GV DiRenzo, KR Zamudio, LF Toledo, ...
Journal of evolutionary biology 32 (3), 287-298, 2019
272019
Simulating metagenomic stable isotope probing datasets with MetaSIPSim
SE Barnett, DH Buckley
BMC Bioinformatics 21 (1), 37, 2020
222020
Evaluating the Microbiome of Hemp
SE Barnett, AR Cala, JL Hansen, J Crawford, DR Viands, LB Smart, ...
Phytobiomes Journal 4 (4), 351-363, 2020
162020
Community organization and metagenomics of bacterial assemblages across local scale pH gradients in northern forest soils
JB Yavitt, CA Roco, SJ Debenport, SE Barnett, JP Shapleigh
Microbial ecology 81 (3), 758-769, 2021
132021
Data analysis for DNA stable isotope probing experiments using multiple window high-resolution SIP
SE Barnett, ND Youngblut, DH Buckley
Stable isotope probing: methods and protocols, 109-128, 2019
102019
Genomic features predict bacterial life history strategies in soil, as identified by metagenomic stable isotope probing
SE Barnett, R Egan, B Foster, EA Eloe-Fadrosh, DH Buckley
Mbio 14 (2), e03584-22, 2023
82023
Tracing carbon metabolism with stable isotope metabolomics reveals the legacy of diverse carbon sources in soil
RC Wilhelm, SE Barnett, TL Swenson, ND Youngblut, CN Koechli, ...
Applied and Environmental Microbiology 88 (22), e00839-22, 2022
82022
Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling
SE Barnett, DH Buckley
Environmental Microbiology, 1– 11, 2023
72023
Bacterial community dynamics explain carbon mineralization and assimilation in soils of different land-use history
SE Barnett, ND Youngblut, DH Buckley
Environmental Microbiology 24 (11), 5230–5247, 2022
62022
Arrive and wait: Inactive bacterial taxa contribute to perceived soil microbiome resilience after a multidecadal press disturbance
SE Barnett, A Shade
Ecology letters 27 (3), e14393, 2024
32024
Controls of Microbially Mediated Soil Carbon Cycling: An Examination of the Effects of Land-use and Life History Strategy on Soil Bacterial Diversity and Activity
SE Barnett
Cornell University, 2021
12021
Seven years of microbial community metagenomes from temperate soils affected by an ongoing coal seam fire
SE Barnett, A Shade
Microbiology Resource Announcements 13 (6), e00198-24, 2024
2024
Soil viral community dynamics over seven years of heat disturbance: spatial variation exceeds temporal in annually sampled soils
SE Barnett, A Shade
bioRxiv, 2024.05. 27.596044, 2024
2024
Identifying active diazotrophs in deep-sea sediment
AE Dekas, BJ Kapili, SE Barnett, DH Buckley
Ocean Sciences Meeting 2020, 2020
2020
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