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C. Alisha Quandt
C. Alisha Quandt
Assistant Professor, University of Colorado Boulder
Verified email at colorado.edu - Homepage
Title
Cited by
Cited by
Year
A class-wide phylogenetic assessment of Dothideomycetes
CL Schoch, PW Crous, JZ Groenewald, EWA Boehm, TI Burgess, ...
Studies in mycology 64 (1), 1-15, 2009
6932009
A phylogenetically-based nomenclature for Cordycipitaceae (Hypocreales)
RM Kepler, JJ Luangsa-Ard, NL Hywel-Jones, CA Quandt, GH Sung, ...
IMA fungus 8, 335-353, 2017
357*2017
Fungi in the marine environment: Open questions and unsolved problems
A Amend, G Burgaud, M Cunliffe, VP Edgcomb, CL Ettinger, MH Gutiérrez, ...
MBio 10 (2), 10.1128/mbio. 01189-18, 2019
277*2019
Phylogenetic-based nomenclatural proposals for Ophiocordycipitaceae (Hypocreales) with new combinations in Tolypocladium
CA Quandt, RM Kepler, W Gams, JPM Araújo, S Ban, HC Evans, ...
IMA fungus 5 (1), 121-134, 2014
2232014
The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster
KE Bushley, R Raja, P Jaiswal, JS Cumbie, M Nonogaki, AE Boyd, ...
PLoS genetics 9 (6), e1003496, 2013
2042013
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum
M Peter, A Kohler, RA Ohm, A Kuo, J Krützmann, E Morin, M Arend, ...
Nature communications 7 (1), 12662, 2016
1612016
Leveraging single-cell genomics to expand the fungal tree of life
SR Ahrendt, CA Quandt, D Ciobanu, A Clum, A Salamov, B Andreopoulos, ...
Nature Microbiology 3 (12), 1417-1428, 2018
1222018
The phylogenetic placement of hypocrealean insect pathogens in the genus Polycephalomyces: an application of One Fungus One Name
R Kepler, S Ban, A Nakagiri, J Bischoff, N Hywel-Jones, CA Owensby, ...
Fungal biology 117 (9), 611-622, 2013
1212013
The genome of an intranuclear parasite, Paramicrosporidium saccamoebae, reveals alternative adaptations to obligate intracellular parasitism
CA Quandt, D Beaudet, D Corsaro, J Walochnik, R Michel, N Corradi, ...
Elife 6, e29594, 2017
962017
New 1F1N Species Combinations in Ophiocordycipitaceae (Hypocreales)
JW Spatafora, CA Quandt, RM Kepler, GH Sung, B Shrestha, ...
IMA fungus 6, 357-362, 2015
85*2015
A growing pandemic: A review of Nosema parasites in globally distributed domesticated and native bees
AC Grupe, CA Quandt
PLoS pathogens 16 (6), e1008580, 2020
702020
Phylogenetic placement of the ectomycorrhizal genus Cenococcum in Gloniaceae (Dothideomycetes)
JW Spatafora, CA Owensby, GW Douhan, EWA Boehm, CL Schoch
Mycologia 104 (3), 758-765, 2012
672012
Morphological, molecular, and ultrastructural characterization of Rozella rhizoclosmatii, a new species in Cryptomycota
PM Letcher, JE Longcore, CA Quandt, D da Silva Leite, TY James, ...
Fungal biology 121 (1), 1-10, 2017
522017
The genome of the truffle-parasite Tolypocladium ophioglossoides and the evolution of antifungal peptaibiotics
CA Quandt, KE Bushley, JW Spatafora
Bmc Genomics 16, 1-14, 2015
502015
Metagenome sequence of E laphomyces granulatus from sporocarp tissue reveals A scomycota ectomycorrhizal fingerprints of genome expansion and a P roteobacteria‐rich microbiome
CA Quandt, A Kohler, CN Hesse, TJ Sharpton, F Martin, JW Spatafora
Environmental Microbiology 17 (8), 2952-2968, 2015
412015
Diploid-dominant life cycles characterize the early evolution of Fungi
KR Amses, DR Simmons, JE Longcore, SJ Mondo, K Seto, GH Jerônimo, ...
Proceedings of the National Academy of Sciences 119 (36), e2116841119, 2022
392022
Improving fungal cultivability for natural products discovery
T Rämä, CA Quandt
Frontiers in Microbiology 12, 706044, 2021
342021
Chromosome rearrangements shape the diversification of secondary metabolism in the cyclosporin producing fungus Tolypocladium inflatum
RA Olarte, J Menke, Y Zhang, S Sullivan, JC Slot, Y Huang, ...
BMC genomics 20, 1-23, 2019
292019
Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides
CA Quandt, Y Di, J Elser, P Jaiswal, JW Spatafora
G3: Genes, Genomes, Genetics 6 (3), 731-741, 2016
292016
Phylogenetic advances in Leotiomycetes, an understudied clade of taxonomically and ecologically diverse fungi
CA Quandt, D Haelewaters
Encyclopedia of mycology 1, 284-294, 2021
252021
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