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Christopher B Barnett
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Ring puckering: a metric for evaluating the accuracy of AM1, PM3, PM3CARB-1, and SCC-DFTB carbohydrate QM/MM simulations
CB Barnett, KJ Naidoo
The Journal of Physical Chemistry B 114 (51), 17142-17154, 2010
1022010
Stereoelectronic and solvation effects determine hydroxymethyl conformational preferences in monosaccharides
CB Barnett, KJ Naidoo
The Journal of Physical Chemistry B 112 (48), 15450-15459, 2008
632008
Molecular details from computational reaction dynamics for the cellobiohydrolase I glycosylation reaction
CB Barnett, KA Wilkinson, KJ Naidoo
Journal of the American Chemical Society 133 (48), 19474-19482, 2011
532011
Free Energies from Adaptive Reaction Coordinate Forces (FEARCF): an application to ring puckering
CB Barnett, KJ Naidoo
Molecular Physics 107 (8-12), 1243-1250, 2009
532009
Pyranose ring transition state is derived from cellobiohydrolase I induced conformational stability and glycosidic bond polarization
CB Barnett, KA Wilkinson, KJ Naidoo
Journal of the American Chemical Society 132 (37), 12800-12803, 2010
512010
The garlic compound ajoene covalently binds vimentin, disrupts the vimentin network and exerts anti-metastatic activity in cancer cells
CH Kaschula, R Tuveri, E Ngarande, K Dzobo, C Barnett, DA Kusza, ...
BMC cancer 19, 1-16, 2019
502019
ProtoCaller: robust automation of binding free energy calculations
M Suruzhon, T Senapathi, MS Bodnarchuk, R Viner, ID Wall, CB Barnett, ...
Journal of Chemical Information and Modeling 60 (4), 1917-1921, 2020
202020
Quinoline-triazole half-sandwich iridium (III) complexes: synthesis, antiplasmodial activity and preliminary transfer hydrogenation studies
DR Melis, CB Barnett, L Wiesner, E Nordlander, GS Smith
Dalton Transactions 49 (33), 11543-11555, 2020
172020
Intuitive, reproducible high-throughput molecular dynamics in Galaxy: a tutorial
SA Bray, T Senapathi, CB Barnett, BA Grüning
Journal of Cheminformatics 12 (1), 54, 2020
162020
Biomolecular reaction and interaction dynamics global environment (BRIDGE)
T Senapathi, S Bray, CB Barnett, B Grüning, KJ Naidoo
Bioinformatics 35 (18), 3508-3509, 2019
132019
BRIDGE: an open platform for reproducible high-throughput free energy simulations
T Senapathi, M Suruzhon, CB Barnett, J Essex, KJ Naidoo
Journal of Chemical Information and Modeling 60 (11), 5290-5295, 2020
112020
The Glycome Analytics Platform an integrative framework for glycobioinformatics
CB Barnett, KF Aoki-Kinoshita, KJ Naidoo
Bioinformatics 32 (19), 3005-3011, 2016
112016
Interpreting medium ring canonical conformers by a triangular plane tessellation of the macrocycle
P Khalili, CB Barnett, KJ Naidoo
The Journal of chemical physics 138 (18), 2013
112013
The Garlic Compound Z‐Ajoene, S‐Thiolates COX2 and STAT3 and Dampens the Inflammatory Response in RAW264.7 Macrophages
JK Hitchcock, N Mkwanazi, C Barnett, LM Graham, AA Katz, R Hunter, ...
Molecular Nutrition & Food Research 65 (3), 2000854, 2021
102021
Calculating Ring Pucker Free Energy Surfaces From Reaction Coordinate Forces
CB Barnett, KJ Naidoo
AIP Conference Proceedings 1102 (1), 214-218, 2009
52009
Discovery of novel cyclic ethers with synergistic antiplasmodial activity in combination with valinomycin
DJ Watson, PR Meyers, KS Acquah, GA Dziwornu, CB Barnett, L Wiesner
Molecules 26 (24), 7494, 2021
42021
Comparative ligand structural analytics illustrated on variably glycosylated MUC1 antigen–antibody binding
CB Barnett, T Senapathi, KJ Naidoo
Beilstein Journal of Organic Chemistry 16 (1), 2540-2550, 2020
42020
PNP diminishes guanosine glycosidic bond strength through restrictive ring pucker as a precursor to phosphorylation
CB Barnett, KJ Naidoo
The Journal of Physical Chemistry B 117 (20), 6019-6026, 2013
42013
Hands-on: Hands-on: Galaxy 101 for everyone
A Fouilloux, N Goué, C Barnett, M Maroni, O Nahorna, D Clements, ...
Galaxy Training Network, 2024
12024
BRIDGE: an open platform for reproducible protein-ligand simulations and free energy of binding calculations
T Senapathi, CB Barnett, KJ Naidoo
Bio-protocol 10 (17), e3731-e3731, 2020
12020
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Articles 1–20