| The short chain fatty acid butyrate imprints an antimicrobial program in macrophages J Schulthess, S Pandey, M Capitani, KC Rue-Albrecht, I Arnold, ... Immunity 50 (2), 432-445. e7, 2019 | 402 | 2019 |
| Comprehensive rare variant analysis via whole-genome sequencing to determine the molecular pathology of inherited retinal disease KJ Carss, G Arno, M Erwood, J Stephens, A Sanchis-Juan, S Hull, K Megy, ... The American Journal of Human Genetics 100 (1), 75-90, 2017 | 305 | 2017 |
| Orchestrating single-cell analysis with Bioconductor RA Amezquita, ATL Lun, E Becht, VJ Carey, LN Carpp, L Geistlinger, ... Nature methods 17 (2), 137-145, 2020 | 258 | 2020 |
| Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle SDE Park, DA Magee, PA McGettigan, MD Teasdale, CJ Edwards, ... Genome biology 16 (1), 1-15, 2015 | 176 | 2015 |
| Plasma metabolomics implicates modified transfer RNAs and altered bioenergetics in the outcomes of pulmonary arterial hypertension CJ Rhodes, P Ghataorhe, J Wharton, KC Rue-Albrecht, C Hadinnapola, ... Circulation 135 (5), 460-475, 2017 | 122 | 2017 |
| Phenotypic Characterization of EIF2AK4 Mutation Carriers in a Large Cohort of Patients Diagnosed Clinically With Pulmonary Arterial Hypertension C Hadinnapola, M Bleda, M Haimel, N Screaton, A Swift, P Dorfmüller, ... Circulation 136 (21), 2022-2033, 2017 | 87 | 2017 |
| RNA-seq Transcriptional Profiling of Peripheral Blood Leukocytes from Cattle Infected with Mycobacterium bovis KE McLoughlin, NC Nalpas, K Rue-Albrecht, JA Browne, DA Magee, ... Frontiers in immunology 5, 396, 2014 | 57 | 2014 |
| Whole-transcriptome, high-throughput RNA sequence analysis of the bovine macrophage response to Mycobacterium bovis infection in vitro NC Nalpas, SDE Park, DA Magee, M Taraktsoglou, JA Browne, ... BMC genomics 14 (1), 1-19, 2013 | 43 | 2013 |
| Comprehensive cancer-predisposition gene testing in an adult multiple primary tumor series shows a broad range of deleterious variants and atypical tumor phenotypes J Whitworth, PS Smith, JE Martin, H West, A Luchetti, F Rodger, G Clark, ... The American Journal of Human Genetics 103 (1), 3-18, 2018 | 42 | 2018 |
| Comparative'omics analyses differentiate Mycobacterium tuberculosis and Mycobacterium bovis and reveal distinct macrophage responses to infection with the human and bovine … KM Malone, K Rue-Albrecht, DA Magee, K Conlon, OT Schubert, ... Microbial genomics 4 (3), 2018 | 40 | 2018 |
| Comparative Functional Genomics and the Bovine Macrophage Response to Strains of the Mycobacterium Genus K Rue-Albrecht, DA Magee, KE Killick, NC Nalpas, SV Gordon, ... Frontiers in immunology 5, 536, 2014 | 39 | 2014 |
| iSEE: interactive summarizedexperiment explorer K Rue-Albrecht, F Marini, C Soneson, ATL Lun F1000Research 7, 2018 | 37 | 2018 |
| Experimental infection of cattle with Mycobacterium tuberculosis isolates shows the attenuation of the human tubercle bacillus for cattle B Villarreal-Ramos, S Berg, A Whelan, S Holbert, F Carreras, FJ Salguero, ... Scientific Reports 8 (1), 1-13, 2018 | 34 | 2018 |
| RNA sequencing provides exquisite insight into the manipulation of the alveolar macrophage by tubercle bacilli NC Nalpas, DA Magee, KM Conlon, JA Browne, C Healy, KE McLoughlin, ... Scientific reports 5 (1), 1-12, 2015 | 32 | 2015 |
| Bi-allelic loss-of-function CACNA1B mutations in progressive epilepsy-dyskinesia KM Gorman, E Meyer, D Grozeva, E Spinelli, A McTague, A Sanchis-Juan, ... The American Journal of Human Genetics 104 (5), 948-956, 2019 | 28 | 2019 |
| Biallelic mutation of ARHGEF18, involved in the determination of epithelial apicobasal polarity, causes adult-onset retinal degeneration G Arno, KJ Carss, S Hull, C Zihni, AG Robson, A Fiorentino, G Black, ... The American Journal of Human Genetics 100 (2), 334-342, 2017 | 26 | 2017 |
| GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data K Rue-Albrecht, PA McGettigan, B Hernández, NC Nalpas, DA Magee, ... BMC bioinformatics 17 (1), 1-12, 2016 | 25 | 2016 |
| De novo truncating mutations in WASF1 cause intellectual disability with seizures Y Ito, KJ Carss, ST Duarte, T Hartley, B Keren, MA Kurian, I Marey, ... The American Journal of Human Genetics 103 (1), 144-153, 2018 | 22 | 2018 |
| Invasive Salmonella exploits divergent immune evasion strategies in infected and bystander dendritic cell subsets A Aulicino, KC Rue-Albrecht, L Preciado-Llanes, G Napolitani, N Ashley, ... Nature communications 9 (1), 1-17, 2018 | 19 | 2018 |
| Integrated computational prediction and experimental validation identifies promiscuous T cell epitopes in the proteome of Mycobacterium bovis D Farrell, G Jones, C Pirson, K Malone, K Rue-Albrecht, AJ Chubb, ... Microbial genomics 2 (8), 2016 | 17 | 2016 |
David MacHughFull Professor of Functional Genomics, University College DublinVerified email at ucd.ie
