Amin Allalou
Amin Allalou
Researcher at Uppsala Univeristy, Sweden
Verified email at
Cited by
Cited by
BlobFinder, a tool for fluorescence microscopy image cytometry
A Allalou, C Wählby
Computer methods and programs in biomedicine 94 (1), 58-65, 2009
Fully automated cellular-resolution vertebrate screening platform with parallel animal processing
TY Chang, C Pardo-Martin, A Allalou, C Wählby, MF Yanik
Lab on a Chip 12 (4), 711-716, 2012
High-throughput hyperdimensional vertebrate phenotyping
C Pardo-Martin, A Allalou, J Medina, PM Eimon, C Wählby, M Fatih Yanik
Nature communications 4 (1), 1-9, 2013
Brain activity patterns in high-throughput electrophysiology screen predict both drug efficacies and side effects
PM Eimon, M Ghannad-Rezaie, G De Rienzo, A Allalou, Y Wu, M Gao, ...
Nature communications 9 (1), 1-14, 2018
Increasing the dynamic range of in situ PLA
CM Clausson, A Allalou, I Weibrecht, S Mahmoudi, M Farnebo, ...
Nature methods 8 (11), 892-893, 2011
TAF1, associated with intellectual disability in humans, is essential for embryogenesis and regulates neurodevelopmental processes in zebrafish
S Gudmundsson, M Wilbe, B Filipek-Górniok, AM Molin, S Ekvall, ...
Scientific reports 9 (1), 1-11, 2019
A detailed analysis of 3D subcellular signal localization
A Pinidiyaarachchi, A Zieba, A Allalou, K Pardali, C Wählby
Cytometry Part A: The Journal of the International Society for Advancement …, 2009
Passive in-vehicle driver breath alcohol detection using advanced sensor signal acquisition and fusion
J Ljungblad, B Hök, A Allalou, H Pettersson
Traffic injury prevention 18 (sup1), S31-S36, 2017
Image based measurements of single cell mtDNA mutation load
A Allalou, FM Rijke, R Jahangir Tafrechi, AK Raap, C Wählby
Scandinavian Conference on Image Analysis, 631-640, 2007
Automated deep-phenotyping of the vertebrate brain
A Allalou, Y Wu, M Ghannad-Rezaie, PM Eimon, MF Yanik
Elife 6, e23379, 2017
Translating GWAS-identified loci for cardiac rhythm and rate using an in vivo image-and CRISPR/Cas9-based approach
B von der Heyde, A Emmanouilidou, E Mazzaferro, S Vicenzi, I Höijer, ...
Scientific reports 10 (1), 1-18, 2020
Behavioral characterization of dmrt3a mutant zebrafish reveals crucial aspects of vertebrate locomotion through phenotypes related to acceleration
A Del Pozo, R Manuel, ABI Gonzalez, HK Koning, J Habicher, H Zhang, ...
ENeuro 7 (3), 2020
Robust signal detection in 3D fluorescence microscopy
A Allalou, A Pinidiyaarachchi, C Wählby
Cytometry Part A: The Journal of the International Society for Advancement …, 2010
zOPT: an open source optical projection tomography system and methods for rapid 3D zebrafish imaging
H Zhang, L Waldmann, R Manuel, H Boije, T Haitina, A Allalou
Biomedical optics express 11 (8), 4290-4305, 2020
The broad role of Nkx3. 2 in the development of the zebrafish axial skeleton
L Waldmann, J Leyhr, H Zhang, C Öhman-Mägi, A Allalou, T Haitina
Plos one 16 (8), e0255953, 2021
Decoding gene expression in 2D and 3D
M Bombrun, P Ranefall, J Lindblad, A Allalou, G Partel, L Solorzano, ...
Scandinavian Conference on Image Analysis, 257-268, 2017
In vivo characterization of candidate genes for heart rate variability identifies culprits for sinoatrial pauses and arrests
B Von der Heyde, A Emmanouilidou, T Klingström, E Mazzaferro, ...
bioRxiv, 1-5, 2018
Chondroitin/dermatan sulfate glycosyltransferase genes are essential for craniofacial development
J Habicher, GK Varshney, L Waldmann, D Snitting, A Allalou, H Zhang, ...
PLoS genetics 18 (2), e1010067, 2022
Analysis of images of biological material
C Johansson, A Allalou, Y Molin, M Sandow, C Wahlby
US Patent 10,902,592, 2021
The role of Gdf5 in the development of the zebrafish fin endoskeleton
L Waldmann, J Leyhr, H Zhang, A Allalou, C Öhman‐Mägi, T Haitina
Developmental Dynamics, 2021
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