Philip Machanick
Philip Machanick
Associate Professor, Department of Computer Science, Rhodes University, South Africa
Verified email at ru.ac.za - Homepage
TitleCited byYear
MEME-ChIP: motif analysis of large DNA datasets
P Machanick, TL Bailey
Bioinformatics 27 (12), 1696-1697, 2011
8162011
Inferring direct DNA binding from ChIP-seq
TL Bailey, P Machanick
Nucleic acids research 40 (17), e128-e128, 2012
2302012
The value of position-specific priors in motif discovery using MEME
T Bailey, M Bodén, T Whitington, P Machanick
BMC bioinformatics 11 (1), 179, 2010
1122010
Restructuring a parallel simulation to improve cache behavior in a shared-memory multiprocessor: A first experience
DR Cheriton, HA Goosen, P Machanick
Proceedings of the International Symposium on Shared Memory Multiprocessing …, 1991
551991
A social construction approach to computer science education
P Machanick
Computer Science Education 17 (1), 1-20, 2007
482007
Identification of molecular compartments and genetic circuitry in the developing mammalian kidney
J Yu, MT Valerius, M Duah, K Staser, JK Hansard, J Guo, J McMahon, ...
Development 139 (10), 1863-1873, 2012
472012
Approaches to addressing the memory wall
P Machanick
http://homes.cs.ru.ac.za/philip/Publications/Techreports/2002/memory-wall …, 2002
412002
Hardware-software trade-offs in a Direct Rambus implementation of the RAMpage memory hierarchy
P Machanick, P Salverda, L Pompe
ASPLOS VIII Proceedings of the eighth international conference on …, 1998
351998
Experience of applying Bloom’s Taxonomy in three courses
P Machanick
Proc. Southern African Computer Lecturers’ Association Conference, 135-144, 2000
212000
Teaching Java backwards
P Machanick
Computers & Education 48 (3), 396-408, 2007
202007
Restructuring a parallel simulation to improve cache behavior in a shared-memory multiprocessor: The value of distributed synchronization
DR Cheriton, HA Goosen, H Holbrook, P Machanick
Seventh Workshop on Parallel and Distributed Simulation (PADS’93), 159--162, 1993
191993
The abstraction-first approach to data abstraction and algorithms
P Machanick
Computers & Education 31 (2), 135-150, 1998
181998
Peer assessment for action learning of data structures and algorithms
P Machanick
Proceedings of the 7th Australasian conference on Computing education-Volume …, 2005
152005
The case for SRAM main memory
P Machanick
ACM SIGARCH Computer Architecture News 24 (5), 23-30, 1996
151996
Differential motif enrichment analysis of paired ChIP-seq experiments
T Lesluyes, J Johnson, P Machanick, TL Bailey
BMC Genomics 15 (752), 2014
122014
Scalability of the RAMpage memory hierarchy
P Machanick, P Salverda
South African Computer Journal, 68-73, 2000
112000
The FOXP2 forkhead domain binds to a variety of DNA sequences with different rates and affinities
H Webb, O Steeb, A Blane, L Rotherham, S Aron, P Machanick, H Dirr, ...
The Journal of Biochemistry 162 (1), 45–54, 2017
92017
How to establish a bioinformatics postgraduate degree programme—a case study from South Africa
P Machanick, ÖT Bishop
Briefings in bioinformatics 16 (2), 346-354, 2015
92015
Preliminary investigation of the RAMpage memory hierarchy
P Machanick, P Salverda
South African Computer Journal, 16-25, 1998
91998
A distributed systems approach to secure Internet mail
P Machanick
Computers & Security 24 (6), 492-499, 2005
82005
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