LINNAEUS: a species name identification system for biomedical literature M Gerner, G Nenadic, CM Bergman BMC bioinformatics 11, 1-17, 2010 | 409 | 2010 |
The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ... BMC bioinformatics 12, 1-19, 2011 | 174 | 2011 |
The GNAT library for local and remote gene mention normalization J Hakenberg, M Gerner, M Haeussler, I Solt, C Plake, M Schroeder, ... Bioinformatics 27 (19), 2769-2771, 2011 | 96 | 2011 |
BioContext: an integrated text mining system for large-scale extraction and contextualization of biomolecular events M Gerner, F Sarafraz, CM Bergman, G Nenadic Bioinformatics 28 (16), 2154-2161, 2012 | 72 | 2012 |
pubmed2ensembl: a resource for mining the biological literature on genes J Baran, M Gerner, M Haeussler, G Nenadic, CM Bergman PloS one 6 (9), e24716, 2011 | 58 | 2011 |
An exploration of mining gene expression mentions and their anatomical locations from biomedical text M Gerner, G Nenadic, CM Bergman Proceedings of the 2010 Workshop on Biomedical Natural Language Processing …, 2010 | 39 | 2010 |
Annotating genes and genomes with DNA sequences extracted from biomedical articles M Haeussler, M Gerner, CM Bergman Bioinformatics 27 (7), 980-986, 2011 | 31 | 2011 |
Towards semi-automated curation: using text mining to recreate the HIV-1, human protein interaction database DG Jamieson, M Gerner, F Sarafraz, G Nenadic, DL Robertson Database 2012, bas023, 2012 | 30 | 2012 |
Gene mention normalization in full texts using GNAT and LINNAEUS I Solt, M Gerner, P Thomas, G Nenadic, CM Bergman, U Leser, ... Proceedings of the BioCreative III workshop (Bethesda, USA), 134-139, 2010 | 14 | 2010 |
Integrating text-mining approaches to identify entities and extract events from the biomedical literature LMA Gerner PQDT-UK & Ireland, 2012 | 1 | 2012 |
Gene mention normalization in full texts using GNAT and LINNAEUS G Nenadic, I Solt, M Gerner, P Thomas, CM Bergman, U Leser, ... BioCreative III Workshop, 2010 | 1 | 2010 |
Named Entity Recognition and Normalization of Species, LINNAEUS M Gerner, G Nenadic Encyclopedia of Systems Biology, 1489-1492, 2013 | | 2013 |
An Exploration of Mining Gene Expression Mentions and their Anatomical Locations from Biomedical Text G Nenadic, M Gerner, CM Bergman BioNLP 2010 Workshop, 2010 | | 2010 |
pubmed2ensembl: Linking Publications and Genes G Nenadic, J Baran, M Gerner, M Haeussler, C Bergman Genome Informatics (UK) 2010, 2010 | | 2010 |