Dawie van Niekerk
Dawie van Niekerk
Lecturer of Systems Biology, Stellenbosch University
Verified email at sun.ac.za - Homepage
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Year
FAIRDOMHub: a repository and collaboration environment for sharing systems biology research
K Wolstencroft, O Krebs, JL Snoep, NJ Stanford, F Bacall, M Golebiewski, ...
Nucleic acids research 45 (D1), D404-D407, 2017
662017
Sustained glycolytic oscillations in individual isolated yeast cells
AK Gustavsson, DD van Niekerk, CB Adiels, FB du Preez, M Goksör, ...
The FEBS journal 279 (16), 2837-2847, 2012
642012
Construction and validation of a detailed kinetic model of glycolysis in Plasmodium falciparum
G Penkler, F Du Toit, W Adams, M Rautenbach, DC Palm, ...
The FEBS journal 282 (8), 1481-1511, 2015
402015
From steady‐state to synchronized yeast glycolytic oscillations I: model construction
FB du Preez, DD van Niekerk, B Kooi, JM Rohwer, JL Snoep
The FEBS journal 279 (16), 2810-2822, 2012
352012
Targeting glycolysis in the malaria parasite Plasmodium falciparum
DD van Niekerk, GP Penkler, F du Toit, JL Snoep
The FEBS journal 283 (4), 634-646, 2016
332016
Allosteric regulation of phosphofructokinase controls the emergence of glycolytic oscillations in isolated yeast cells
AK Gustavsson, DD van Niekerk, CB Adiels, B Kooi, M Goksör, JL Snoep
The FEBS journal 281 (12), 2784-2793, 2014
302014
From steady‐state to synchronized yeast glycolytic oscillations II: model validation
FB du Preez, DD van Niekerk, JL Snoep
The FEBS journal 279 (16), 2823-2836, 2012
272012
Strange-particle production via the weak interaction
GB Adera, BIS Van Der Ventel, DD Van Niekerk, T Mart
Physical Review C 82 (2), 025501, 2010
252010
The JWS online simulation database
M Peters, JJ Eicher, DD van Niekerk, D Waltemath, JL Snoep
Bioinformatics 33 (10), 1589-1590, 2017
192017
Heterogeneity of glycolytic oscillatory behaviour in individual yeast cells
AK Gustavsson, DD van Niekerk, CB Adiels, M Goksör, JL Snoep
FEBS letters 588 (1), 3-7, 2014
152014
A combined experimental and modelling approach for the Weimberg pathway optimisation.
L Shen, M Kohlhaas, J Enoki, R Meier, B Schönenberger, R Wohlgemuth, ...
Nature Communications 11 (1), 1098, 2020
142020
Quantitative analysis of drug effects at the whole-body level: a case study for glucose metabolism in malaria patients
JL Snoep, K Green, J Eicher, DC Palm, G Penkler, F du Toit, N Walters, ...
Biochemical Society Transactions 43 (6), 1157-1163, 2015
72015
Relativistic description of inclusive quasielastic proton-nucleus scattering with relativistic distorted-wave impulse approximation and random-phase approximation
DD Van Niekerk, BIS Van Der Ventel, NP Titus, GC Hillhouse
Physical Review C 83 (4), 044607, 2011
42011
Phosphofructokinase controls the acetaldehyde-induced phase shift in isolated yeast glycolytic oscillators
DD Van Niekerk, AK Gustavsson, M Mojica-Benavides, CB Adiels, ...
Biochemical Journal 476 (2), 353-363, 2019
32019
Relativistic distorted-wave analysis of quasielastic proton-nucleus scattering
NP Titus, BIS Van Der Ventel, DD Van Niekerk, GC Hillhouse
Physical Review C 83 (4), 044616, 2011
32011
Intercellular communication induces glycolytic synchronization waves between individually oscillating cells
CB Mojica-Benavides, Martin and van Niekerk, David D. and Mijalkov, Mite and ...
Proceedings of the National Academy of Sciences 118 (6), e2010075118, 2021
22021
Studying Glycolytic Oscillations in Individual Yeast Cells by Combining Fluorescence Microscopy with Microfluidics and Optical Tweezers
AK Gustavsson, AA Banaeiyan, DD van Niekerk, JL Snoep, CB Adiels, ...
Current protocols in cell biology 82 (1), e70, 2018
12018
FAIRDOM: Reproducible Systems Biology through FAIR Asset Management
N Stanford, F Bacall, M Golebiewski, O Krebs, R Kuzyakiv, Q Nguyen, ...
Reproducibility, standards and SOP in bioinformatics: Combined CHARME–EMBnet …, 2016
12016
The weak production of hypernuclei
DD van Niekerk, BIS van der Ventel
The European Physical Journal A 33 (3), 273-276, 2007
12007
Uncovering the effects of heterogeneity and parameter sensitivity on within-host dynamics of disease: malaria as a case study
S Horn, JL Snoep, DD van Niekerk
BMC Bioinformatics 22 (1), 1-21, 2021
2021
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