A mosaic monoploid reference sequence for the highly complex genome of sugarcane O Garsmeur, G Droc, R Antonise, J Grimwood, B Potier, K Aitken, ... Nature communications 9 (1), 2638, 2018 | 347 | 2018 |
The plant B3 superfamily K Swaminathan, K Peterson, T Jack Trends in plant science 13 (12), 647-655, 2008 | 272 | 2008 |
Breeding progress and preparedness for mass‐scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar J Clifton‐Brown, A Harfouche, MD Casler, H Dylan Jones, WJ Macalpine, ... Gcb Bioenergy 11 (1), 118-151, 2019 | 151 | 2019 |
Transcriptomic analyses of xylan degradation by Prevotella bryantii and insights into energy acquisition by xylanolytic bacteroidetes D Dodd, YH Moon, K Swaminathan, RI Mackie, IKO Cann Journal of Biological Chemistry 285 (39), 30261-30273, 2010 | 143 | 2010 |
Genomic and small RNA sequencing of Miscanthus × giganteusshows the utility of sorghum as a reference genome sequence for Andropogoneae grasses K Swaminathan, MS Alabady, K Varala, E De Paoli, I Ho, DS Rokhsar, ... Genome biology 11, 1-18, 2010 | 115 | 2010 |
Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey K Swaminathan, K Varala, ME Hudson BMC genomics 8, 1-13, 2007 | 111 | 2007 |
A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy K Swaminathan, WB Chae, T Mitros, K Varala, L Xie, A Barling, ... BMC genomics 13, 1-17, 2012 | 103 | 2012 |
Genome biology of the paleotetraploid perennial biomass crop Miscanthus T Mitros, AM Session, BT James, GA Wu, MB Belaffif, LV Clark, S Shu, ... Nature Communications 11 (1), 5442, 2020 | 79 | 2020 |
Identification and characterization of a novel stay‐green QTL that increases yield in maize J Zhang, KA Fengler, JL Van Hemert, R Gupta, N Mongar, J Sun, ... Plant biotechnology journal 17 (12), 2272-2285, 2019 | 58 | 2019 |
An enhancer trap line associated with a D-class cyclin gene in Arabidopsis K Swaminathan, Y Yang, N Grotz, L Campisi, T Jack Plant Physiology 124 (4), 1658-1667, 2000 | 54 | 2000 |
Mapping the genome of Miscanthus sinensis for QTL associated with biomass productivity JM Gifford, WB Chae, K Swaminathan, SP Moose, JA Juvik GCB Bioenergy 7 (4), 797-810, 2015 | 46 | 2015 |
A detailed gene expression study of the Miscanthusgenus reveals changes in the transcriptome associated with the rejuvenation of spring rhizomes A Barling, K Swaminathan, T Mitros, BT James, J Morris, O Ngamboma, ... BMC genomics 14, 1-16, 2013 | 40 | 2013 |
Rapid genotyping of soybean cultivars using high throughput sequencing K Varala, K Swaminathan, Y Li, ME Hudson PloS one 6 (9), e24811, 2011 | 36 | 2011 |
Evolutionary divergence of phytochrome protein function in Zea mays PIF3 signaling I Kumar, K Swaminathan, K Hudson, ME Hudson Journal of experimental botany 67 (14), 4231-4240, 2016 | 35 | 2016 |
Transcriptional responses indicate maintenance of photosynthetic proteins as key to the exceptional chilling tolerance of C4 photosynthesis in Miscanthus× giganteus AK Spence, J Boddu, D Wang, B James, K Swaminathan, SP Moose, ... Journal of Experimental Botany 65 (13), 3737-3747, 2014 | 35 | 2014 |
Three founding ancestral genomes involved in the origin of sugarcane N Pompidor, C Charron, C Hervouet, S Bocs, G Droc, R Rivallan, ... Annals of botany 127 (6), 827-840, 2021 | 29 | 2021 |
A mosaic monoploid reference sequence for the highly complex genome of sugarcane. Nat Commun 9: 2638 O Garsmeur, G Droc, R Antonise, J Grimwood, B Potier, K Aitken, ... | 29 | 2018 |
Genetic Analysis of Putative Triploid Miscanthus Hybrids and Tetraploid M. sacchariflorus Collected from Sympatric Populations of Kushima, Japan MS Dwiyanti, A Rudolph, K Swaminathan, A Nishiwaki, Y Shimono, ... BioEnergy Research 6, 486-493, 2013 | 29 | 2013 |
Development of microsatellite markers in autopolyploid sugarcane and comparative analysis of conserved microsatellites in sorghum and sugarcane BT James, C Chen, A Rudolph, K Swaminathan, JE Murray, JK Na, ... Molecular Breeding 30, 661-669, 2012 | 24 | 2012 |
Rapid, organ-specific transcriptional responses to light regulate photomorphogenic development in dicot seedlings Y Li, K Swaminathan, ME Hudson Plant physiology 156 (4), 2124-2140, 2011 | 22 | 2011 |