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Joshua Der
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Phylotranscriptomic analysis of the origin and early diversification of land plants
NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ...
Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014
10022014
One thousand plant transcriptomes and the phylogenomics of green plants
Nature 574 (7780), 679-685, 2019
7102019
The Amborella Genome and the Evolution of Flowering Plants
Amborella Genome Project
Science 342 (6165), 1241089, 2013
572*2013
Data access for the 1,000 Plants (1KP) project
N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ...
GigaScience 3, 17, 2014
5172014
The butterfly plant arms-race escalated by gene and genome duplications
PP Edger, HM Heidel-Fischer, M Bekaert, J Rota, G Glöckner, AE Platts, ...
Proceedings of the National Academy of Sciences 112 (27), 8362-8366, 2015
3782015
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
R Ming, R VanBuren, Y Liu, M Yang, Y Han, L Li, Q Zhang, MJ Kim, ...
Genome Biology 14, R41, 2013
3242013
A revised classification of Santalales
DL Nickrent, V Malécot, R Vidal-Russell, JP Der
Taxon 59 (2), 538-558, 2010
2792010
Fern genomes elucidate land plant evolution and cyanobacterial symbioses
FW Li, P Brouwer, L Carretero-Paulet, S Cheng, J De Vries, PM Delaux, ...
Nature plants 4 (7), 460-472, 2018
2612018
De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum
J Der, M Barker, N Wickett, C dePamphilis, P Wolf
BMC Genomics 12, 99, 2011
1512011
Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns
FW Li, JC Villarreal, S Kelly, CJ Rothfels, M Melkonian, E Frangedakis, ...
Proceedings of the National Academy of Sciences 111 (18), 6672-6677, 2014
1502014
A molecular phylogeny of Santalaceae (Santalales)
JP Der, DL Nickrent
Systematic Botany 33 (1), 107-116, 2008
1462008
Comparative transcriptome analyses reveal core parasitism genes and suggest gene duplication and repurposing as sources of structural novelty
Z Yang, EK Wafula, LA Honaas, H Zhang, M Das, M Fernandez-Aparicio, ...
Molecular Biology and Evolution 32 (3), 767-790, 2014
1142014
Assembly and Validation of the Genome of the Nonmodel Basal Angiosperm Amborella
S Chamala, AS Chanderbali, JP Der, T Lan, B Walts, VA Albert, ...
Science 342 (6165), 1516-1517, 2013
1062013
Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome
LA Honaas, EK Wafula, NJ Wickett, JP Der, Y Zhang, PP Edger, ...
PloS one 11 (1), e0146062, 2016
1042016
Global chloroplast phylogeny and biogeography of bracken (Pteridium; Dennstaedtiaceae)
JP Der, JA Thomson, JK Stratford, PG Wolf
American Journal of Botany 96 (5), 1041-1049, 2009
992009
Discovery of the photosynthetic relatives of the "Maltese mushroom" Cynomorium
D Nickrent, J Der, F Anderson
BMC Evolutionary Biology 5, 38, 2005
972005
The evolution of chloroplast genes and genomes in ferns
PG Wolf, JP Der, AM Duffy, JB Davidson, AL Grusz, KM Pryer
Plant Molecular Biology 76 (3), 251-261, 2011
912011
Phylogenetic relationships of Santalales with insights into the origins of holoparasitic Balanophoraceae
HJ Su, JM Hu, FE Anderson, JP Der, DL Nickrent
Taxon 64 (3), 491-506, 2015
872015
Single-copy nuclear genes place haustorial Hydnoraceae within Piperales and reveal a Cretaceous origin of multiple parasitic angiosperm lineages
J Naumann, K Salomo, JP Der, EK Wafula, JF Bolin, E Maass, L Frenzke, ...
PLoS One 8 (11), e79204, 2013
862013
Transcriptome Analysis Reveals the Same 17 S-Locus F-Box Genes in Two Haplotypes of the Self-Incompatibility Locus of Petunia inflata
JS Williams, JP Der, CW dePamphilis, T Kao
The Plant Cell 26 (7), 2873-2888, 2014
822014
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Articles 1–20