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Zachary R. Lewis
Zachary R. Lewis
Senior Scientist
Verified email at alleninstitute.org - Homepage
Title
Cited by
Cited by
Year
High-plex imaging of RNA and proteins at subcellular resolution in fixed tissue by spatial molecular imaging
S He, R Bhatt, C Brown, EA Brown, DL Buhr, K Chantranuvatana, ...
Nature Biotechnology 40 (12), 1794-1806, 2022
1732022
Female‐specific increase in primordial germ cells marks sex differentiation in threespine stickleback (Gasterosteus aculeatus)
ZR Lewis, MC McClellan, JH Postlethwait, WA Cresko, RH Kaplan
Journal of morphology 269 (8), 909-921, 2008
882008
Graded levels of Pax2a and Pax8 regulate cell differentiation during sensory placode formation
MN McCarroll, ZR Lewis, MD Culbertson, BL Martin, D Kimelman, ...
Development 139 (15), 2740-2750, 2012
792012
High-plex multiomic analysis in FFPE tissue at single-cellular and subcellular resolution by spatial molecular imaging
S He, R Bhatt, B Birditt, C Brown, E Brown, K Chantranuvatana, ...
bioRxiv, 2021.11. 03.467020, 2021
572021
Convergent evolutionary reduction of atrial septation in lungless salamanders
ZR Lewis, J Hanken
Journal of Anatomy 230 (1), 16-29, 2017
272017
Chondrogenic and gliogenic subpopulations of neural crest play distinct roles during the assembly of epibranchial ganglia
MD Culbertson, ZR Lewis, AV Nechiporuk
PloS one 6 (9), e24443, 2011
232011
Gene co-expression reveals the modularity and integration of C4 and CAM in Portulaca
IS Gilman, JJ Moreno-Villena, ZR Lewis, EW Goolsby, EJ Edwards
Plant Physiology 189 (2), 735-753, 2022
202022
Subcellular characterization of over 100 proteins in FFPE tumor biopsies with CosMx Spatial Molecular Imager
ZR Lewis, T Phan-Everson, G Geiss, M Korukonda, R Bhatt, C Brown, ...
Cancer Research 82 (12_Supplement), 3878-3878, 2022
52022
Expression of a novel surfactant protein gene is associated with sites of extrapulmonary respiration in a lungless salamander
ZR Lewis, JA Dorantes, J Hanken
Proceedings of the Royal Society B 285 (1888), 20181589, 2018
52018
Causes and Consequences of Lung Loss in Salamanders
ZR Lewis
Harvard University, 2016
52016
We are not so special
ZR Lewis, CW Dunn
Elife 7, e38726, 2018
42018
Lung development in lungless salamanders!
ZR Lewis, R Kerney, J Hanken
Developmental Biology 356 (1), 250-251, 2011
22011
Developmental basis of evolutionary lung loss in plethodontid salamanders
ZR Lewis, R Kerney, J Hanken
Science Advances 8 (33), eabo6108, 2022
12022
A complete pipeline for high‐plex spatial proteomic profiling and analysis of neural cell phenotypes on the CosMx™ Spatial Molecular Imager and AtoMx™ Spatial Informatics …
A Rosenbloom, S Bonnett, M Conner, T Phan‐Everson, Z Lewis, G Ong, ...
Alzheimer's & Dementia 19, e076665, 2023
2023
A machine learning one-class logistic regression model to predict stemness for single cell transcriptomics and spatial omics
FS Dezem, M Marção, B Ben-Cheikh, N Nikulina, A Omotoso, D Burnett, ...
BMC genomics 24 (1), 717, 2023
2023
Single cell spatial molecular imaging of 76-plex proteins in clinical cancer samples in response to personalized treatment
ZR Lewis, B Birditt, E Brown, K Chantranuvatana, B Filanoski, C Corless, ...
Cancer Research 83 (7_Supplement), 5641-5641, 2023
2023
A complete pipeline for high-plex spatial proteomic profiling and analysis on the CosMx spatial molecular imager and AtoMx spatial informatics platform
T Phan-Everson, Z Lewis, G Ong, Y Liang, E Brown, L Pan, A Wardhani, ...
Cancer Research 83 (7_Supplement), 4617-4617, 2023
2023
A Machine Learning One-Class Logistic Regression Model to Predict Stemness in Single Cell Transcriptomics and Spatial Omics Datasets
FD Segato, M Marcao, B Ben-Cheikh, N Nikulina, A Omotoso, D Burnett, ...
bioRxiv, 2023.05. 04.539461, 2023
2023
INOVATIVE IN VIVO (IN OVO) CAM MODEL TO PREDICT EFFICACY AND MODE OF ACTION OF A NEW ANTITUMOR VACCINE STC-1010 ON HUMAN COLORECTAL ADENOCARCINOMA
Y Wang, C Tortorelli, A Peyronnier, B Pinteur, L Chalus, P Bravetti, ...
JOURNAL FOR IMMUNOTHERAPY OF CANCER 10, A991-A991, 2022
2022
147 Comprehensive in situ immune phenotyping with the CosMx™ high plex protein assay
T Phan-Everson, J Chen, Z Lewis, G Geiss, Y Liang, E Brown, L Pan, ...
Journal for ImmunoTherapy of Cancer 10 (Suppl 2), 2022
2022
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Articles 1–20