|Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology|
K Brudey, JR Driscoll, L Rigouts, WM Prodinger, A Gori, SA Al-Hajoj, ...
BMC microbiology 6 (1), 1-17, 2006
|Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis|
MR Farhat, BJ Shapiro, KJ Kieser, R Sultana, KR Jacobson, TC Victor, ...
Nature genetics 45 (10), 1183-1189, 2013
|Patients with active tuberculosis often have different strains in the same sputum specimen|
RM Warren, TC Victor, EM Streicher, M Richardson, N Beyers, ...
American journal of respiratory and critical care medicine 169 (5), 610-614, 2004
|Evaluation of the Xpert MTB/RIF assay for the diagnosis of pulmonary tuberculosis in a high HIV prevalence setting|
G Theron, J Peter, R van Zyl-Smit, H Mishra, E Streicher, S Murray, ...
American journal of respiratory and critical care medicine 184 (1), 132-140, 2011
|Drug resistance in Mycobacterium tuberculosis|
R Johnson, EM Streicher, GE Louw, RM Warren, PD Van Helden, ...
Current issues in molecular biology 8 (2), 97-112, 2006
|Emergence and spread of extensively and totally drug-resistant tuberculosis, South Africa|
M Klopper, RM Warren, C Hayes, NCG van Pittius, EM Streicher, B Müller, ...
Emerging infectious diseases 19 (3), 449, 2013
|Early treatment outcomes and HIV status of patients with extensively drug-resistant tuberculosis in South Africa: a retrospective cohort study|
K Dheda, K Shean, A Zumla, M Badri, EM Streicher, L Page-Shipp, ...
The Lancet 375 (9728), 1798-1807, 2010
|Long-term outcomes of patients with extensively drug-resistant tuberculosis in South Africa: a cohort study|
E Pietersen, E Ignatius, EM Streicher, B Mastrapa, X Padanilam, A Pooran, ...
The Lancet 383 (9924), 1230-1239, 2014
|A Recently Evolved Sublineage of the Mycobacterium tuberculosis Beijing Strain Family Is Associated with an Increased Ability to Spread and Cause Disease|
M Hanekom, GD Van Der Spuy, E Streicher, SL Ndabambi, CRE McEvoy, ...
Journal of clinical microbiology 45 (5), 1483-1490, 2007
|Genome-wide analysis of multi-and extensively drug-resistant Mycobacterium tuberculosis|
F Coll, J Phelan, GA Hill-Cawthorne, MB Nair, K Mallard, S Ali, ...
Nature genetics 50 (2), 307-316, 2018
|Microevolution of the Direct Repeat Region of Mycobacterium tuberculosis: Implications for Interpretation of Spoligotyping Data|
RM Warren, EM Streicher, SL Sampson, GD Van Der Spuy, M Richardson, ...
Journal of Clinical Microbiology 40 (12), 4457-4465, 2002
|Emergence of increased resistance and extensively drug-resistant tuberculosis despite treatment adherence, South Africa|
AD Calver, M Murray, OJ Strauss, EM Streicher, M Hanekom, T Liversage, ...
Emerging infectious diseases 16 (2), 264, 2010
|Spoligotype Signatures in the Mycobacterium tuberculosis Complex|
EM Streicher, TC Victor, G Van Der Spuy, C Sola, N Rastogi, ...
Journal of clinical microbiology 45 (1), 237-240, 2007
|gyrA mutations and phenotypic susceptibility levels to ofloxacin and moxifloxacin in clinical isolates of Mycobacterium tuberculosis|
FA Sirgel, RM Warren, EM Streicher, TC Victor, PD van Helden, ...
Journal of Antimicrobial Chemotherapy 67 (5), 1088-1093, 2012
|A global perspective on pyrazinamide resistance: systematic review and meta-analysis|
MG Whitfield, HM Soeters, RM Warren, T York, SL Sampson, EM Streicher, ...
PloS one 10 (7), e0133869, 2015
|Genetic Determinants of Drug Resistance in Mycobacterium tuberculosis and Their Diagnostic Value|
MR Farhat, R Sultana, O Iartchouk, S Bozeman, J Galagan, P Sisk, ...
American journal of respiratory and critical care medicine 194 (5), 621-630, 2016
|Outcomes, infectiousness, and transmission dynamics of patients with extensively drug-resistant tuberculosis and home-discharged patients with programmatically incurable …|
K Dheda, JD Limberis, E Pietersen, J Phelan, A Esmail, M Lesosky, ...
The lancet Respiratory medicine 5 (4), 269-281, 2017
|Epistasis between antibiotic resistance mutations drives the evolution of extensively drug-resistant tuberculosis|
S Borrell, Y Teo, F Giardina, EM Streicher, M Klopper, J Feldmann, ...
Evolution, medicine, and public health 2013 (1), 65-74, 2013
|Implementation of GenoType MTBDRplus Reduces Time to Multidrug-Resistant Tuberculosis Therapy Initiation in South Africa|
KR Jacobson, D Theron, EA Kendall, MF Franke, M Barnard, ...
Clinical infectious diseases 56 (4), 503-508, 2013
|Drug-associated adverse events and their relationship with outcomes in patients receiving treatment for extensively drug-resistant tuberculosis in South Africa|
K Shean, E Streicher, E Pieterson, G Symons, R van Zyl Smit, G Theron, ...
PloS one 8 (5), e63057, 2013